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Qasim-Hussain-Code / pcan_assembly_dependence

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How PCAn point centromere calls change with assembly contiguity, read technology and sequencing depth, measured on 134 budding yeast assemblies and 69 Saccharomyces cerevisiae strains.

python bash benchmark bioinformatics comparative-genomics reproducibility genome-assembly de-novo-assembly fimo long-read-sequencing meme-suite saccharomyces-cerevisiae kinetochore centromere motif-search evolutionary-genomics budding-yeast point-centromere saccharomycetaceae assembly-contiguity
  • Updated Oct 10, 2026
  • Python

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