[dependabot]

Bumps the pre-commit group with 2 updates: https://github.com/astral-sh/ruff-pre-commit and https://github.com/zizmorcore/zizmor-pre-commit.

Updates https://github.com/astral-sh/ruff-pre-commit from v0.17.0 to 0.17.1

Release notes

Sourced from https://github.com/astral-sh/ruff-pre-commit's releases.

v0.17.1

See: https://github.com/astral-sh/ruff/releases/tag/0.17.1

Commits

• 38bfb07 Mirror: 0.17.1
• See full diff in compare view

Updates https://github.com/zizmorcore/zizmor-pre-commit from v1.30.1 to 1.31.1

Release notes

Sourced from https://github.com/zizmorcore/zizmor-pre-commit's releases.

v1.31.1

Sponsorship is appreciated!

Bug Fixes 🐛🔗

• Fixed a regression in 1.31.0 where some ignore comments/configurations would no longer apply to the dangerous-triggers audit (#2450)

v1.31.0

Sponsorship is appreciated!

Enhancements 🌱🔗

• The typosquat-uses audit now supports pre-commit config inputs (#2437)

• The self-hosted-runner audit is now significantly more precise (#2350)

  Many thanks to @​ubiratansoares for proposing and implementing this enhancement!

• The dangerous-triggers audit now considers the issue_comment trigger fundamentally dangerous (#2396)

• zizmor is now aware of the image_version workflow trigger (#2397)

• The dangerous-triggers audit now produces more precise finding/diagnostic spans (#2402)

• The cache-poisoning audit is now aware of pnpm/setup (#2409)

• The unpinned-images audit now produces more precise findings when the user's workflow contains an indirect matrix (#2395)

  Many thanks to @​ubiratansoares for proposing and implementing this enhancement!

• The cache-poisoning audit is now aware of GitHub's new cache-mode: setting, and will skip any findings that would occur when a job has an effective cache-mode: none (#2418)

• The cache-poisoning audit now flags usages of cache-mode: write and cache-mode: write-only with dangerous triggers, i.e. triggers that give an attacker privileged code execution (#2426)

• zizmor now uses a tree-sitter grammar for PowerShell that's more precise/capable of capturing more non-trivial PowerShell expressions (#2444)

Bug Fixes 🐛🔗

• Fixed a class of false positives/imprecisions in adhoc-packages that caused some pnpm and yarn invocations to be misclassified as package installations (#2386)

  Many thanks to @​marcalexiei for implementing this improvement!

• Fixed a bug where zizmor would fail to honor Git submodules and worktrees when discovering configuration files relative to a repo root (#2390)

• Fixed a bug where the ref-version-mismatch audit would crash on unusually placed version comments (#2394)

• Fixed a bug where zizmor would fail to handle some pre-commit inputs that use prek extensions to the language_version and default_language_version keys (#2413)

• Fixed a bug where the use-trusted-publishing audit would fail to detect certain true-positive patterns inside of PowerShell blocks (#2444)

Commits

• c92afdf Mirror: 1.31.1
• d25b2b1 Mirror: 1.31.0
• 04df6d7 chore: drop Python 3.10 support (EOL) (#65)
• fe0957c Bump astral-sh/setup-uv from 10.1.0 to 10.2.0 in the github-actions group (#64)
• de807da Bump the github-actions group with 2 updates (#63)
• See full diff in compare view

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[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 84.37%. Comparing base (45a5607) to head (60ec471).
✅ All tests successful. No failed tests found.

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #4453   +/-   ##
=======================================
  Coverage   84.37%   84.37%           
=======================================
  Files         134      134           
  Lines       12750    12750           
=======================================
  Hits        10758    10758           
  Misses       1992     1992           

Flag	Coverage Δ
hatch-test.low-vers	81.14% <ø> (ø)
hatch-test.pre	84.18% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

[read-the-docs-business]

Documentation build overview

📚 scanpy | 🛠️ Build #4650416 | 📁 Comparing 60ec471 against latest (6f523e6)

  🔍 Preview build  

274 files changed · ± 274 modified

± Modified

• basic_usage.html
• community.html
• contributors.html
• genindex.html
• index.html
• installation.html
• py-modindex.html
• references.html
• search.html
• usage-principles.html
• and 264 more...