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ci: bump the actions-deps group with 3 updates - #4452

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Oct 30, 2026
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flying-sheep merged 2 commits into
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dependabot/github_actions/actions-deps-48d98a17b9

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@dependabot dependabot Bot commented on behalf of github Oct 29, 2026

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Bumps the actions-deps group with 3 updates: astral-sh/setup-uv, actions/setup-python and pypa/gh-action-pypi-publish.

Updates astral-sh/setup-uv from 10.3.0 to 10.3.2

Release notes

Sourced from astral-sh/setup-uv's releases.

v10.3.2 🌈 update known checksums for 0.13.5

Changes

🧰 Maintenance

📚 Documentation

v10.3.1 🌈 preserve cache error class names in save-cache bundle

Changes

This release includes a fix so that multiple concurrent workflows trying to upload the same cache no longer warn

##[warning]Failed to save: Unable to reserve cache with key ..., another job may be creating this cache.

🐛 Bug fixes

🧰 Maintenance

📚 Documentation

⬆️ Dependency updates

Commits
  • 07a047e chore: update known checksums for 0.13.5 (#1103)
  • e1b8536 docs: update version references to v10.3.1 (#1102)
  • 18d369b chore(deps): roll up Dependabot updates (#1101)
  • 4ad2329 chore: update known checksums for 0.13.4 (#1099)
  • 4bc6759 chore: update known checksums for 0.13.2/0.13.3 (#1098)
  • c97f06e fix: preserve cache error class names in save-cache bundle (#1093)
  • 8ca4be0 chore: update known checksums for 0.13.1 (#1094)
  • b627d85 docs: cache-dependency-glob matches relative to the working directory (#1092)
  • f8c8897 Verify npm dependency signatures before builds (#1027)
  • f64d32b docs: update version references to v10.3.0 (#1090)
  • See full diff in compare view

Updates actions/setup-python from 7.0.0 to 7.1.0

Release notes

Sourced from actions/setup-python's releases.

v7.1.0

What's Changed

Enhancements

Dependency Upgrade

New Contributors

Full Changelog: actions/setup-python@v7.0.0...v7.1.0

Commits
  • 6d4fd22 Cache upgrade to 6.3.0 (#1370)
  • ec52d0a Bump @​typescript-eslint/eslint-plugin from 8.62.0 to 8.71.1 (#1369)
  • ff73b24 Bump prettier from 3.8.4 to 3.9.9 and package.json from 7.0.0 to 7.1.0 (#1363)
  • 0e40890 Bump brace-expansion from 5.0.9 to 5.0.12 (#1365)
  • 3892123 Bump ts-jest from 29.4.11 to 29.4.14 (#1361)
  • 6609657 Bump undici from 6.28.0 to 6.29.0 (#1364)
  • e1be392 Bump @​types/semver from 7.7.1 to 7.8.0 (#1359)
  • 06da627 Bump @​vercel/ncc from 0.44.0 to 0.45.0 (#1357)
  • af9bcc7 Bump eslint-plugin-jest from 29.15.2 to 29.16.6 (#1342)
  • 7aeabeb Bump @​typescript-eslint/parser from 8.62.0 to 8.70.0 (#1343)
  • Additional commits viewable in compare view

Updates pypa/gh-action-pypi-publish from 1.14.2 to 1.14.3

Release notes

Sourced from pypa/gh-action-pypi-publish's releases.

v1.14.3

[!important] 🚨 This release includes fixes for GHSA-5xjx-3w67-w9x9 patched up by @​sethmlarson💰 in #427 and in other places across the ecosystem.

Additional ecosystem and related mitigations beyond you might want to watch out for:

🛠️ Security Tightening

@​webknjaz💰 made sure the dependency tree within the action runtime uses hash-checking from now on via pypa/gh-action-pypi-publish#420.

🪞 Full Diff: pypa/gh-action-pypi-publish@v1.14.2...v1.14.3

🧔‍♂️ Release Manager: @​webknjaz 🇺🇦

💬 Discuss on Bluesky 🦋, on Mastodon 🐘 and on GitHub.

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Commits
  • 7245906 Merge pull request #427 from sethmlarson/certifi-sigstore
  • 331eccb Upgrade certifi and sigstore
  • f68fee4 💰 Sync the FUNDING config
  • c0d6f8e Merge branch 'integrity/runtime/deptree' into unstable/v1
  • 9090099 🧪 Make smoke test deps hash-pinned in CI
  • 34e40c2 📌 Bump pip-tools managed transitive deptrees
  • e800ed5 👷 Enable hash-checking in the runtime deptree 🔗
  • dd8c5f4 🔧 Make pip-tools config available in container
  • See full diff in compare view

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Bumps the actions-deps group with 3 updates: [astral-sh/setup-uv](https://github.com/astral-sh/setup-uv), [actions/setup-python](https://github.com/actions/setup-python) and [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish).


Updates `astral-sh/setup-uv` from 10.3.0 to 10.3.2
- [Release notes](https://github.com/astral-sh/setup-uv/releases)
- [Commits](astral-sh/setup-uv@1c37ad0...07a047e)

Updates `actions/setup-python` from 7.0.0 to 7.1.0
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](actions/setup-python@5fda3b9...6d4fd22)

Updates `pypa/gh-action-pypi-publish` from 1.14.2 to 1.14.3
- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)
- [Commits](pypa/gh-action-pypi-publish@dc37677...7245906)

---
updated-dependencies:
- dependency-name: astral-sh/setup-uv
  dependency-version: 10.3.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: actions-deps
- dependency-name: actions/setup-python
  dependency-version: 7.1.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: actions-deps
- dependency-name: pypa/gh-action-pypi-publish
  dependency-version: 1.14.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: actions-deps
...

Signed-off-by: dependabot[bot] <support@github.com>
@codecov

codecov Bot commented Oct 29, 2026 •

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 84.37%. Comparing base (45a5607) to head (ba314d5).
⚠️ Report is 1 commits behind head on main.
✅ All tests successful. No failed tests found.

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #4452   +/-   ##
=======================================
  Coverage   84.37%   84.37%           
=======================================
  Files         134      134           
  Lines       12750    12750           
=======================================
  Hits        10758    10758           
  Misses       1992     1992           
Flag Coverage Δ
hatch-test.low-vers 81.14% <ø> (ø)
hatch-test.pre 84.18% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

@read-the-docs-business

read-the-docs-business Bot commented Oct 29, 2026 •

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Documentation build overview

📚 scanpy | 🛠️ Build #4650414 | 📁 Comparing ba314d5 against latest (6f523e6)

  🔍 Preview build  

274 files changed · ± 274 modified

± Modified

@flying-sheep
flying-sheep enabled auto-merge (squash) October 30, 2026 06:22
@flying-sheep
flying-sheep merged commit 1a421f2 into main Oct 30, 2026
16 of 17 checks passed
@flying-sheep
flying-sheep deleted the dependabot/github_actions/actions-deps-48d98a17b9 branch October 30, 2026 06:42
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