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fix(py): add pandas to the gradme extras - #229

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Neclow merged 1 commit into
sbhattlab:mainfrom
Neclow:fix/gradme-pandas-extra
Nov 6, 2026
Merged

Neclow merged 1 commit into
sbhattlab:mainfrom
Neclow:fix/gradme-pandas-extra

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@Neclow Neclow commented Nov 6, 2026

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opt/utils.py converts the dist.dna output to a pandas DataFrame (pandas2ri), and GradME indexes it by taxon name, but pandas was not declared in the [gradme] extras.

dnadist converts the dist.dna output to a pandas DataFrame (pandas2ri),
and GradME indexes it by taxon name, but pandas was not declared.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
@Neclow
Neclow merged commit 95bab7d into sbhattlab:main Nov 6, 2026
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Neclow deleted the fix/gradme-pandas-extra branch November 6, 2026 14:37
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