Hi Alex,
Thanks for developing the tool!
I am trying to run the interactive mode of ModDotPlot v.0.9.9 on a single chromosome using the following command:
moddotplot interactive -f /home/user/reference/chr1.fa
But I have got the following error using ModDotPlot built from the GitHub repo:
| / | | | | __ \ | | | __ | | | |
| \ / | ___ | | | | | | ___ | | | |) | | ___ | |_
| |/| |/ _ \ / ` | | | | |/ _ | _| | /| |/ _ | __|
| | | | () | (| | | || | () | |_ | | | | () | |
|| ||_/ _,| |/ _/ _| || |_|_/ __|
v0.9.9
Running ModDotPlot in interactive mode
Traceback (most recent call last):
File "/home/user/software/ModDotPlot/ModDotPlot/venv/bin/moddotplot", line 5, in
from moddotplot.main import main
File "/home/user/software/ModDotPlot/ModDotPlot/venv/lib/python3.11/site-packages/moddotplot/main.py", line 11, in
sys.exit(main())
^^^^^^
File "/home/user/software/ModDotPlot/ModDotPlot/venv/lib/python3.11/site-packages/moddotplot/moddotplot.py", line 650, in main
if args.forward:
^^^^^^^^^^^^
AttributeError: 'Namespace' object has no attribute 'forward'
I have tried ModDotPlot v.0.9.9 installed using pip as well, but got the same error. Either running it on WSL or a Ubuntu server produce the same error as well.
However, this code can be run under ModDotPlot v.0.9.8 without any issues.
Are there any solutions on this?
Best regards
Hi Alex,
Thanks for developing the tool!
I am trying to run the interactive mode of ModDotPlot v.0.9.9 on a single chromosome using the following command:
moddotplot interactive -f /home/user/reference/chr1.faBut I have got the following error using ModDotPlot built from the GitHub repo:
I have tried ModDotPlot v.0.9.9 installed using
pipas well, but got the same error. Either running it on WSL or a Ubuntu server produce the same error as well.However, this code can be run under ModDotPlot v.0.9.8 without any issues.
Are there any solutions on this?
Best regards