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- Status: Open.#772 In lanl/PyBNF;
config_keys.rst has fallen behind the grammar: 64 of 200 accepted keys have no entry, and config.rst still presents it as the complete list
documentationDocs are absent, stale, or state something untrueDocs are absent, stale, or state something untrueStatus: Open.#765 In lanl/PyBNF;adaptive MCMC carries a rolling-buffer design that was reduced to a single slot: arr_length is a constant 1, factor is never incremented, and five conditions are always true
tech debtScaffolding, dead code, or a misleading structure. No user-visible change intended.Scaffolding, dead code, or a misleading structure. No user-visible change intended.Status: Open.#764 In lanl/PyBNF;PSO collision tie-break can loop forever: a fixed 1e-6 perturbation is below one ULP for a linear parameter above ~1e10
bugSomething isn't workingSomething isn't workinglatent bugProven in code, but unreachable on shipped defaults and never yet observed in a real runProven in code, but unreachable on shipped defaults and never yet observed in a real runStatus: Open.#721 In lanl/PyBNF;Constraint gradient/Hessian use the raw sensitivity tensor while the penalty is scored on the normalized column, so the ADR-0053 chain rule is dropped
bugSomething isn't workingSomething isn't workinghigh priorityUrgent or important workUrgent or important worksilent-incorrectnessCompletes without error, but the reported result is wrong, incomplete, or missingCompletes without error, but the reported result is wrong, incomplete, or missingStatus: Open.#718 In lanl/PyBNF;A positive-support prior family gets no wall at its support floor, so negative parameter values are accepted, simulated and scored
bugSomething isn't workingSomething isn't workinghigh priorityUrgent or important workUrgent or important worksilent-incorrectnessCompletes without error, but the reported result is wrong, incomplete, or missingCompletes without error, but the reported result is wrong, incomplete, or missingStatus: Open.#711 In lanl/PyBNF;Parallel tempering rewinds the iteration counter after a replica exchange, so iteration exchange_every+1 is processed twice and can write two samples.txt rows for one iteration
bugSomething isn't workingSomething isn't workingsilent-incorrectnessCompletes without error, but the reported result is wrong, incomplete, or missingCompletes without error, but the reported result is wrong, incomplete, or missingStatus: Open.#710 In lanl/PyBNF;Shrink the differential evolution population over the run, floored at the processor count (L-SHADE's population-size reduction)
enhancementNew feature or requestNew feature or requestgatedBlocked on an external trigger, e.g. an upstream release; revisit when it firesBlocked on an external trigger, e.g. an upstream release; revisit when it firesStatus: Open.#699 In lanl/PyBNF;Port the BNGL parameter-expression evaluator to libpetab-python's BnglModel, then delete the staging copy
low priorityNot urgent; can wait indefinitely without harm. No priority label means medium.Not urgent; can wait indefinitely without harm. No priority label means medium.Status: Open.#681 In lanl/PyBNF;Experimental design should be able to average over an ensemble, not only compute at the best fit
enhancementNew feature or requestNew feature or requestexploratoryExploratory/optional: an open question or proposal to evaluate before committing to buildExploratory/optional: an open question or proposal to evaluate before committing to buildStatus: Open.#669 In lanl/PyBNF;Investigate synthetic likelihood as a principled objective for stochastic models
exploratoryExploratory/optional: an open question or proposal to evaluate before committing to buildExploratory/optional: an open question or proposal to evaluate before committing to buildquestionFurther information is requestedFurther information is requestedStatus: Open.#665 In lanl/PyBNF;Stop hopeless starts early in a multi-start fit instead of running every one to completion
enhancementNew feature or requestNew feature or requestexploratoryExploratory/optional: an open question or proposal to evaluate before committing to buildExploratory/optional: an open question or proposal to evaluate before committing to buildStatus: Open.#662 In lanl/PyBNF;