All pull requests

Pull requests

• ci: bump certifi from 2026.7.22 to 2026.10.19

  dependenciespython:uv
  #25·dependabot[bot] opened Oct 21, 2026Bot·

  ·

• ci: bump uv from 0.12.19 to 0.13.4

  dependenciespython:uv
  #24·dependabot[bot] opened Oct 21, 2026Bot·

  ·

• chore: name the maintainer of the fork in the package metadata

  #23·Hoeze opened Oct 16, 2026Member·

  ·

• fix(vcf): keep only sequence ALT alleles in scan_vcf_variants

  #22·Hoeze opened Oct 16, 2026Member·

  ·

• feat(extractors): yield batches of encoded ref and alt sequences

  #21·Hoeze opened Oct 16, 2026Member·11/11·

  ·

• feat: ship type annotations with py.typed

  #20·Hoeze opened Oct 16, 2026Member·10/11·

  ·

• feat(transforms)!: make translate keyword-only and strict

  #19·Hoeze opened Oct 16, 2026Member·9/11·

  ·

• feat(extractors)!: replace the variant matchers with scan_variant_pairs

  #18·Hoeze opened Oct 16, 2026Member·8/11·

  ·

• feat(vcf)!: scan VCF files with keyword-only options instead of kwargs

  #17·Hoeze opened Oct 16, 2026Member·7/11·

  ·

• feat!: drop legacy helpers from kipoiseq

  #15·Hoeze opened Oct 15, 2026Member·6/11·

  ·

• feat(extractors)!: take any reference that has extract and chrom_sizes

  #14·Hoeze opened Oct 15, 2026Member·5/11·

  ·

• feat(dataclasses)!: immutable Interval and one strand rule for resizing

  #13·Hoeze opened Oct 15, 2026Member·4/11·

  ·

• feat(encoders)!: one-hot encode and tokenize with Encoder and Tokenizer

  #12·Hoeze opened Oct 15, 2026Member·3/11·

  ·
  1

• ci: release breaking changes as minor versions before 1.0

  #11·Hoeze opened Oct 15, 2026Member·2/11·

  ·

• docs: write the API pages in Markdown

  #10·Hoeze opened Oct 15, 2026Member·1/11·

  ·

• chore(main): release 0.1.1

  autorelease: pending
  #9·github-actions[bot] opened Oct 15, 2026Bot·

  ·