Issues

• parametrization of diffsplice to get meaningful results

  comprna/SUPPA#224 · Filter by author albamasmalavila opened on Jun 4, 2026
  4

• Running diffSplice with paired samples

  comprna/SUPPA#223 · Filter by author albamasmalavila opened on May 21, 2026
  4

• SUPPA2 on single cell data generated on 10x and Pacbio platform

  comprna/SUPPA#222 · Filter by author leewqa opened on Mar 25, 2026
  6

• Segmentation fault in clusterEvents

  comprna/SUPPA#221 · Filter by author bluemood2011 opened on Feb 2, 2026

• SUPPA2 clustering analysis on diffSPlicing with nan value

  comprna/SUPPA#220 · Filter by author Mvirale opened on Jul 8, 2025

• how to figure out the ioe file in AL

  comprna/SUPPA#219 · Filter by author xhuashen opened on Jul 7, 2025

• Error in psiPerEvent: "Unexpected number of fields. 6 expected, 5 given"

  comprna/SUPPA#218 · Filter by author Taylorain opened on Jul 3, 2025
  4

• Do I need to merge all ioe files?

  comprna/SUPPA#217 · Filter by author wangduo-ux opened on Jun 20, 2025

• psiPerEvent, input error

  comprna/SUPPA#216 · Filter by author yinfeitan opened on Jun 19, 2025
  3

• Identifying AS events per isoform after diffSplice in SUPPA2

  comprna/SUPPA#215 · Filter by author Freeddows opened on May 27, 2025
  1

• What is the corresponding caculation formula for TPM? And could SUPPA be used in long-read RNA-seq?

  comprna/SUPPA#214 · Filter by author xyz202310 opened on May 23, 2025
  1

• IndexError when running diffSplice

  comprna/SUPPA#213 · Filter by author ipatop opened on May 10, 2025
  3

• 0 or 1-based coordinates

  comprna/SUPPA#212 · Filter by author KSLiu98 opened on May 7, 2025
  1

• Psi Not Calculated for Event Error: Similar to Issue #201

  comprna/SUPPA#211 · Filter by author stevenjbark opened on Apr 15, 2025
  5

• Question about long processing time for specific conditions in DAS analysis

  comprna/SUPPA#210 · Filter by author YIGUIz opened on Mar 18, 2025
  4

• so.0: version `GLIBC_PRIVATE' not found

  comprna/SUPPA#209 · Filter by author luo-sw opened on Feb 23, 2025
  2

• ERROR:__main__:Unknown error: (<class 'IndexError'>, IndexError('list index out of range'), <traceback object at 0x2b44d38defc0>)

  comprna/SUPPA#208 · Filter by author Tang-pro opened on Feb 14, 2025
  6

• What to do with ioe files with multiple samples?

  comprna/SUPPA#207 · Filter by author Tang-pro opened on Feb 14, 2025
  3

• Suppa output coordinates

  comprna/SUPPA#206 · Filter by author joaossantoss28 opened on Feb 12, 2025
  1

• Problems with PSI Events Calculation and ID Formatting Script in SUPPA

  comprna/SUPPA#205 · Filter by author stevenjbark opened on Feb 10, 2025
  3

• New release on PyPI and bioconda?

  comprna/SUPPA#203 · Filter by author JudithBernett opened on Jan 28, 2025
  1

• can suppa2 do the analysis of microorganisms?

  comprna/SUPPA#202 · Filter by author cent0134 opened on Jan 2, 2025
  1

• diffsplice index error

  comprna/SUPPA#196 · Filter by author Amhaslam opened on Sep 16, 2024
  6

• ERROR:lib.tools:1, in line 2. Skipping line... ERROR:lib.tools:49151, in line 49152. Skipping line...

  comprna/SUPPA#193 · Filter by author Bio-info-ai opened on Sep 2, 2024
  2

• psiPerEvent - "transcript not found"

  comprna/SUPPA#185 · Filter by author bvien24 opened on Mar 11, 2024
  6