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Mark Singularities in Soft Matter Systems as published in Contemporary Physics - #123
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…y Physics Assemble _research/index.md from chunks and add singularities visual dictionary PNG.
Restore PNG from prior good blob after accidental $file: overwrite.
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| Layer / File(s) | Summary |
|---|---|
Research topics and publication content _tmp/research-index-chunks/* |
The chunks add research topics, three preprints, and publication entries from 2026 through 2017. Entries include available topic tags, links, images, and video embeds. |
Assemble and update publication listings scripts/assemble_index.py, _research/index.md, _org_profile/README.md |
The script concatenates the five chunks into the research index. The index moves “Singularities in Soft Matter Systems” from Work in Progress to 2026 publication [26], with tags, links, and an image. The profile list adds this citation and removes “Impacting spheres”. |
Priority: ⬇️ Low
Estimated code review effort: 2 (Simple) | ~10 minutes
Change: Other
Merge Risk: ⚪ Minimal · up to 7ffa6
The publication entry, generated research index, and image reference are consistent. No merge-blocking issue is evident.
🚥 Pre-merge checks | ✅ 5
✅ Passed checks (5 passed)
| Check name | Status | Explanation |
|---|---|---|
| Docstring Coverage | ✅ Passed | No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check. Docstring coverage is scoped to functions touched by this diff. Analyzed 0 functions across 1… |
| Linked Issues check | ✅ Passed | Check skipped because no linked issues were found for this pull request. |
| Out of Scope Changes check | ✅ Passed | Check skipped because no linked issues were found for this pull request. |
| Description Check | ✅ Passed | Check skipped - CodeRabbit’s high-level summary is enabled. |
| Title check | ✅ Passed | The title clearly and concisely describes the main change: marking “Singularities in Soft Matter Systems” as published in Contemporary Physics. |
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✨ Simplify code
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🟡 Changes recommended
The temporary chunks and assembly script duplicate the canonical research index and should be removed.
1 open finding
What changed in this PR
Publishes the Contemporary Physics review on the research page and updates the organization profile.
Changes:
- Moves the paper from work in progress to publication
[26]. - Adds DOI/arXiv links and a representative image.
- Updates recent publications and adds temporary assembly artifacts.
| File | Description |
|---|---|
_research/index.md |
Adds the published paper entry. |
_org_profile/README.md |
Updates recent publications. |
assets/images/research/singularities-soft-matter-visual-dictionary.png |
Adds the publication image. |
scripts/assemble_index.py |
Adds a chunk assembly helper. |
_tmp/research-index-chunks/0.md |
Duplicates the first index segment. |
_tmp/research-index-chunks/1.md |
Duplicates the second index segment. |
_tmp/research-index-chunks/2.md |
Duplicates the third index segment. |
_tmp/research-index-chunks/3.md |
Duplicates the fourth index segment. |
_tmp/research-index-chunks/4.md |
Duplicates the final index segment. |
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Review: Mark Singularities in Soft Matter Systems as published in Contemporary Physics
Reviewed commit 7ffa6449bd6ca9d5cc5944836a60e508e9bf1e24: +411/−10 across eight reviewable files; the PNG is excluded from code review.
The published entry, DOI/arXiv links, image reference, numbering, and recent-publications block are consistent. The assembly helper concatenates the five chunks without separators, correctly preserving their mid-line boundaries. No verified P0/P1 issues found.
Non-blocking note
P2: see the comment #123 (comment) by copilot-pull-request-reviewer[bot]
Verification
- Exact-head packet: complete patches, rulebook, and peer-thread snapshot; stable HEAD.
- Supplied CI snapshot: build, content-rules, and dependency/security hygiene passed; deployment skipped.
- Central conflict-marker and added-whitespace checks passed.
- Static review only; no PR code or repository scripts were executed, and no local Jekyll build was run.
Approved; the duplicate temporary assembly artifacts are a non-blocking maintenance concern.
There was a problem hiding this comment.
🟡 Changes recommended
The featured-paper limit and lazy-loading requirement should be addressed before approval.
2 open findings
1 resolved since last review
🧠 Review effort: Balanced
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| <h3 id="26">[26] <strong>Sanjay, V.</strong> Singularities in Soft Matter Systems. Contemporary Physics (2026).</h3> | ||
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| <div class="tags"><span>Soft-matter-singularities</span><span>Featured</span></div> |
| [](https://doi.org/10.1080/00107514.2026.2721118) | ||
| [](https://arxiv.org/abs/2608.11060) | ||
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| {: width="75%" .center-block style="display: block; margin-left: auto; margin-right: auto;"} |
Description
The Contemporary Physics review Singularities in Soft Matter Systems is now published (DOI 10.1080/00107514.2026.2721118). The research page still listed it under Work in Progress as accepted.
Type of Change
Changes Made
[26]1-16, but no volume/issue yet, so those are omitted)2608.11060)_org_profile/README.mdrecent-publications blockFigure choice
Figure 1 — visual dictionary (
singularities-soft-matter-visual-dictionary.png). It is the paper’s opening overview of pinch-off, contact-line, cusp, and beyond-interface cutoffs, so it represents the whole review better than a single-mechanism panel, and it remains readable at card/thumbnail size.Testing Done
https://api.crossref.org/works/10.1080/00107514.2026.2721118bundle exec jekyll serve(Ruby/Jekyll not available in this agent environment for the lab site; relying on PR CI)Checklist
Additional Notes
Related listings also updated (or noted) outside this repo:
VatsalSy/Vatsal_CV— BibTeX + CV peer-reviewed section (separate PR)comphy-lab/VatsalSy— selected papers on the personal about page (separate PR)Summary by CodeRabbit