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MATLAB application

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Yiteng Dang edited this page Jul 9, 2018 · 6 revisions

Model extensions

  • Multiple cell types

Possible features to add

  • Visualization of P_eq map in simulation (with/without vector field), with trajectory
  • Plot I_max in (p,I) trajectories.
  • Input initial lattice by hand (e.g. by clicking cells).
  • Plot of the density of states in p,I space.

Troubleshooting

The following is a list of possible errors the MATLAB application could give, which are not listed under "Issues". The errors below are displayed as "Error msg. #" in the MATLAB command window.

  • Error msg. 1: Folder could not be made. To save simulation time, computed distance between cells are stored as .mat files in a subfolder "./data/dist_matrix_hex" of the root directory from which the application is run (typically the current directory in MATLAB). If this folder does not exist, MATLAB will attempt to create such a folder. The error message indicates that the folder could not be created.

    • Possible solution: Check whether you have permission to edit the folder, possibly as admin.
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