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- Cell_ACDC Public
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
- SpotMAX Public Forked from ElpadoCan/SpotMAX
SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification
- cellpose Public Forked from MouseLand/cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
- Nutrient-switch-analysis Public
Code for analysis and figures in https://doi.org/10.1101/2024.10.04.616606 Includes system for categorising and following single-cells and their progeny after a nutrient switch (downstream of CellACDC).
- micro-sam Public Forked from keejkrej/micro-sam
Segment Anything for Microscopy - Modified to be compatible with Cell-ACDC
- Cell_ACDC_Tianyi Public Forked from keejkrej/Cell_ACDC
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
- yeast_mito_segregation_with_growth_rate Public Forked from statgenlmu/yeast_mito_segregation
Simulation and data analysis tools for inheritance of mitochondrial nucleoids in baker's yeast - Modified to take into account growth rate
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