Marpaia/flow and mother machine integration - #38
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Gonza10V merged 65 commits intoOct 3, 2026
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# Conflicts: # viewer/README.md # viewer/src/main.ts
Initialize tutorial founders below their sampled division thresholds
Keep the reference grid fixed for each viewer dataset
Preserve channel names through checkpoints and scene rendering
Define conservative cell-occupied transport and executable reference cases
Add cooperative live-session Stop and reliable port reuse
Render matching capsule surfaces and release replaced instance buffers
Add persistent device-geometry visibility control
Add persistent per-channel fixed concentration scales
Export checkpoint recordings and replay verified frames offline
Diagnose out-of-plane motion and document tutorial dimensionality
Document and verify tutorial commands across backends and shells
Add composite intracellular species coloring
…ive remapping, exchange weights, and transport ledgers.
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integration into the biophysics review branch to check new features