Issues

• Update ms2query with recent versions

  iomega/ms2query#261 · Filter by author julianpollmann opened on Nov 13, 2025
  1

• Make retrieving the matched spectrum easier

  iomega/ms2query#257 · Filter by author niekdejonge opened on Apr 24, 2025

• Weights only load failed

  iomega/ms2query#256 · Filter by author dmendez92 opened on Feb 26, 2025
  2

• Add nearest neighbor search

  iomega/ms2query#240 · Filter by author niekdejonge opened on Jun 4, 2024

• Allow searching for library compounds without mass spectrum

  iomega/ms2query#236 · Filter by author niekdejonge opened on Mar 22, 2024
  4

• Make library creation more robust

  iomega/ms2query#202 · Filter by author florian-huber opened on Aug 20, 2023
  1

• Update ms2query cleaning to use matchms pipeline

  code structure
  iomega/ms2query#197 · Filter by author niekdejonge opened on Aug 7, 2023

• Split MS2Query in run and train

  iomega/ms2query#192 · Filter by author niekdejonge opened on May 24, 2023

• Store embeddings in different file format

  iomega/ms2query#191 · Filter by author niekdejonge opened on May 24, 2023

• Allow partial reuse of compound class annotations

  iomega/ms2query#188 · Filter by author niekdejonge opened on May 18, 2023

• MS2DeepScore

  iomega/ms2query#183 · Filter by author eeko-kon opened on May 4, 2023
  3

• split unit and integration tests

  code structure
  iomega/ms2query#157 · Filter by author niekdejonge opened on Nov 15, 2022

• Paralalize MS2Query

  computational performance
  iomega/ms2query#156 · Filter by author niekdejonge opened on Oct 31, 2022
  4

• Create CleanSpectra class

  code structure
  iomega/ms2query#153 · Filter by author niekdejonge opened on Oct 18, 2022

• Create ms2query model object

  code structure
  iomega/ms2query#66 · Filter by author niekdejonge opened on Mar 12, 2021