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return dspath - - -def _gather_test_files(dspath: str, exclude_keywords: list[str]) -> list[str]: - """Get test files from dataset path, relative to dataset.""" - files = [] - for r, _, f in os.walk(dspath): - for file in f: - fname = os.path.join(r, file) - fname = fname.replace(dspath, '') - if not any(keyword in fname for keyword in exclude_keywords): - files.append(fname) - - return files - - -dspath = _download_test_data(TEST_DATA_DICT, 'eeg_matchingpennies') -files = _gather_test_files(dspath, EXCLUDE_KEYWORDS) - @pytest.fixture(scope='module') def validator() -> BIDSValidator: @@ -53,12 +17,6 @@ def validator() -> BIDSValidator: return validator -@pytest.mark.parametrize('fname', files) -def test_datasets(validator: BIDSValidator, fname: str) -> None: - """Test that is_bids returns true for each file in a valid BIDS dataset.""" - assert validator.is_bids(fname) - - @pytest.mark.parametrize( 'fname', [ diff --git a/tests/test_legacy_api.py b/tests/test_legacy_api.py new file mode 100644 index 0000000..6109529 --- /dev/null +++ b/tests/test_legacy_api.py @@ -0,0 +1,31 @@ +import os +from pathlib import Path + +import pytest + +from bids_validator import BIDSValidator + + +@pytest.fixture(scope='module') +def validator() -> BIDSValidator: + return BIDSValidator() + + +@pytest.mark.parametrize( + 'example', + [ + 'ds001', + 'ds000117', + 'pet001', + 'eeg_matchingpennies', + 'dwi_deriv', + ], +) +def test_example(validator: BIDSValidator, examples: Path, example: str) -> None: + ds = examples / example + for root, _dirs, files in os.walk(ds): + for file in files: + fname = str(Path(root).joinpath(file).relative_to(ds).as_posix()) + if fname == '.bidsignore': + continue + assert validator.is_bids(f'/{fname}') diff --git a/tox.ini b/tox.ini index 639b7a9..2708320 100644 --- a/tox.ini +++ b/tox.ini @@ -60,14 +60,9 @@ deps = pre: git+https://github.com/bids-standard/bids-specification.git\#subdirectory=tools/schemacode commands = - 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