diff --git a/FastOMA.nf b/FastOMA.nf index 2252849..b14c23c 100644 --- a/FastOMA.nf +++ b/FastOMA.nf @@ -201,7 +201,7 @@ process hog_big{ publishDir path: params.genetrees_folder, enabled: params.write_genetrees, pattern: "*tsv.gz" input: - each rhogsbig + each path(rhogsbig) path species_tree val nr_species @@ -243,7 +243,7 @@ process hog_rest{ publishDir path: params.genetrees_folder, enabled: params.write_genetrees, pattern: "*tsv.gz" input: - each rhogsrest + each path(rhogsrest) path species_tree output: path "pickle_hogs"