Issues

• Discuss assigning a DOI for citation

  question
  ArcInstitute/ScreenPro2#108 · Filter by author abearab opened on Feb 23, 2026
  3

  

• CLI related bugs

  bug
  ArcInstitute/ScreenPro2#96 · Filter by author abearab opened on Sep 22, 2024
  

• Implement empirical p-value formula by comparing with non-targeting distribution

  analysishelp wanted
  ArcInstitute/ScreenPro2#83 · Filter by author abearab opened on Jul 26, 2024 · Benchmark ScreenPro2 in CRISPR screen data analysis tasks
  2

  

• Functions for common QC and phenotype level plots

  essentialgood first issueworkflow
  ArcInstitute/ScreenPro2#79 · Filter by author abearab opened on Jul 17, 2024 · Data Visualization Features
  1

  

• Implement methods for nominating synthetic lethal interactions

  analysisenhancement
  ArcInstitute/ScreenPro2#72 · Filter by author abearab opened on Jul 4, 2024

• UMI collapse

  analysisenhancement
  ArcInstitute/ScreenPro2#70 · Filter by author abearab opened on Jun 25, 2024 · Benchmark ScreenPro2 in CRISPR screen data analysis tasks

• Functions to build data dashboard and interactive plots

  enhancementessential
  ArcInstitute/ScreenPro2#63 · Filter by author abearab opened on May 23, 2024 · Data Visualization Features
  1

  

• Reformat assays objects to be sub-class of AnnData class

  dataenhancement
  ArcInstitute/ScreenPro2#50 · Filter by author abearab opened on May 1, 2024
  1

• mismatch allowance for sequence counting task

  analysisenhancement
  ArcInstitute/ScreenPro2#47 · Filter by author abearab opened on Apr 26, 2024 · Benchmark ScreenPro2 in CRISPR screen data analysis tasks
  1

• Add tutorials

  documentationenhancement
  ArcInstitute/ScreenPro2#31 · Filter by author abearab opened on Jan 27, 2024
  

• Implement methods for phenotype calculation and statistical analysis

  analysisenhancementgood first issue
  ArcInstitute/ScreenPro2#12 · Filter by author abearab opened on Dec 12, 2023 · Benchmark ScreenPro2 in CRISPR screen data analysis tasks
  1

• Add a section for background and references

  documentation
  ArcInstitute/ScreenPro2#7 · Filter by author abearab opened on Dec 11, 2023
  1